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Python for Bioinformatics

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ISBN-10: 0763751863

ISBN-13: 9780763751869

Edition: 2009

Authors: Jason Kinser

List price: $119.95
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Description:

Python for Bioinformatics provides a clear introduction to the Python programming language and demonstrates how it is useful in programming for bioinformatics. Ideal for those with some knowledge of
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Book details

List price: $119.95
Copyright year: 2009
Publisher: Jones & Bartlett Learning, LLC
Publication date: 6/30/2008
Binding: Paperback
Pages: 417
Size: 7.00" wide x 10.00" long x 0.88" tall
Weight: 1.694
Language: English

Thomas Lindblad is a professor at the Royal Institute of Technology (Physics) in Stockholm. Working and teaching nuclear and environmental physics his main interest is with sensors, signal processing and intelligent data analysis of torrent data from experiments on-line accelerators, in space, etc. Jason Kinser is an associate professor at George Mason University. He has developed a plethora of image processing applications in the medical, military, and industrial fields. He has been responsible for the conversion of PCNN theory into practical applications providing many improvements in both speed and performance.

Introduction
NumPy and SciPy
Image Manipulation
The Akando and Dancer Modules
Statistics
Parsing DNA Data Files
Sequence Alignment
Dynamic Programming
Tandem Repeats
Hidden Markov Models
Genetic Algorithms
Multiple Sequence Alignment
Gapped Alignments
Trees
Text Mining
Measuring Complexity
Clustering
Self-Organizing Maps
Principal Component Analysis
Species Identification
Fourier Transforms
Correlations
Numerical Sequence Alignment
Gene Expression Array Files
Spot Finding and Measurement
Spreadsheet Arrays and Data Displays
Applications with Expression Arrays
Index