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Preface | |
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Introduction | |
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Aims | |
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Outline | |
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Motivating Examples | |
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Survival Analysis | |
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Proportional Hazards Models | |
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Censoring | |
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Partial Likelihood | |
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The Bayesian Paradigm | |
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Sampling from the Posterior Distribution | |
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Informative Prior Elicitation | |
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Why Bayes? | |
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Exercises | |
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Parametric Models | |
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Exponential Model | |
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Weibull Model | |
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Extreme Value Model | |
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Log-Normal Model | |
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Gamma Model | |
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Exercises | |
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Semiparametric Models | |
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Piecewise Constant Hazard Model | |
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Models Using a Gamma Process | |
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Gamma Process on Cumulative Hazard | |
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Gamma Process with Grouped-Data Likelihood | |
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Relationship to Partial Likelihood | |
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Gamma Process on Baseline Hazard | |
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Prior Elicitation | |
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Approximation of the Prior | |
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Choices of Hyperparameters | |
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Sampling from the Joint Posterior Distribution of ([beta], [delta], a[subscript 0]) | |
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A Generalization of the Cox Model | |
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Beta Process Models | |
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Beta Process Priors | |
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Interval Censored Data | |
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Correlated Gamma Processes | |
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Dirichlet Process Models | |
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Dirichlet Process Prior | |
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Dirichlet Process in Survival Analysis | |
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Dirichlet Process with Doubly Censored Data | |
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Mixtures of Dirichlet Process Models | |
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Conjugate MDP Models | |
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Nonconjugate MDP Models | |
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MDP Priors with Censored Data | |
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Inclusion of Covariates | |
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Exercises | |
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Frailty Models | |
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Proportional Hazards Model with Frailty | |
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Weibull Model with Gamma Frailties | |
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Gamma Process Prior for H[subscript 0](t) | |
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Piecewise Exponential Model for h[subscript 0](t) | |
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Positive Stable Frailties | |
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A Bayesian Model for Institutional Effects | |
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Posterior Likelihood Methods | |
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Methods Based on Partial Likelihood | |
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Multiple Event and Panel Count Data | |
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Multilevel Multivariate Survival Data | |
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Bivariate Measures of Dependence | |
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Exercises | |
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Cure Rate Models | |
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Introduction | |
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Parametric Cure Rate Model | |
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Models | |
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Prior and Posterior Distributions | |
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Posterior Computation | |
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Semiparametric Cure Rate Model | |
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An Alternative Semiparametric Cure Rate Model | |
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Prior Distributions | |
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Multivariate Cure Rate Models | |
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Models | |
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The Likelihood Function | |
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The Prior and Posterior Distributions | |
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Computational Implementation | |
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Appendix | |
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Exercises | |
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Model Comparison | |
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Posterior Model Probabilities | |
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Variable Selection in the Cox Model | |
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Prior Distribution on the Model Space | |
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Computing Prior and Posterior Model Probabilities | |
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Criterion-Based Methods | |
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The L Measure | |
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The Calibration Distribution | |
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Conditional Predictive Ordinate | |
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Bayesian Model Averaging | |
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BMA for Variable Selection in the Cox Model | |
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Identifying the Models in A' | |
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Assessment of Predictive Performance | |
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Bayesian Information Criterion | |
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Model Selection Using BIC | |
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Exponential Survival Model | |
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The Cox Proportional Hazards Model | |
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Exercises | |
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Joint Models for Longitudinal and Survival Data | |
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Introduction | |
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Joint Modeling in AIDS Studies | |
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Joint Modeling in Cancer Vaccine Trials | |
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Joint Modeling in Health-Related Quality of Life Studies | |
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Methods for Joint Modeling of Longitudinal and Survival Data | |
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Partial Likelihood Models | |
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Joint Likelihood Models | |
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Mixture Models | |
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Bayesian Methods for Joint Modeling of Longitudinal and Survival Data | |
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Exercises | |
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Missing Covariate Data | |
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Introduction | |
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The Cure Rate Model with Missing Covariate Data | |
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A General Class of Covariate Models | |
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The Prior and Posterior Distributions | |
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Model Checking | |
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Appendix | |
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Exercises | |
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Design and Monitoring of Randomized Clinical Trials | |
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Group Sequential Log-Rank Tests for Survival Data | |
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Bayesian Approaches | |
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Range of Equivalence | |
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Prior Elicitation | |
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Predictions | |
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Checking Prior-Data Compatibility | |
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Bayesian Sample Size Determination | |
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Alternative Approaches to Sample Size Determination | |
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Exercises | |
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Other Topics | |
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Proportional Hazards Models Built from Monotone Functions | |
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Likelihood Specification | |
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Prior Specification | |
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Time-Dependent Covariates | |
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Accelerated Failure Time models | |
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MDP Prior for [theta subscript i] | |
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Polya Tree Prior for [theta subscript i] | |
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Bayesian Survival Analysis Using MARS | |
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The Bayesian Model | |
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Survival Analysis with Frailties | |
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Change Point Models | |
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Basic Assumptions and Model | |
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Extra Poisson Variation | |
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Lag Functions | |
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Recurrent Tumors | |
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Bayesian Inference | |
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The Poly-Weibull Model | |
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Likelihood and Priors | |
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Sampling the Posterior Distribution | |
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Flexible Hierarchical Survival Models | |
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Three Stages of the Hierarchical Model | |
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Implementation | |
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Bayesian Model Diagnostics | |
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Bayesian Latent Residuals | |
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Prequential Methods | |
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Future Research Topics | |
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Appendix | |
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Exercises | |
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List of Distributions | |
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References | |
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Author Index | |
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Subject Index | |