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| Preface | |
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| Contributors | |
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| Biochemistry, Cell, and Molecular Biology | |
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| The Cell | |
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| Nucleic Acids and Proteins: Modern Linguistics for the Genomics and Bioinformatics Era | |
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| Structure and Function of Cell Organelles | |
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| Cell Signaling | |
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| Transcription and Translation | |
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| DNA Replication, Repair, and Recombination | |
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| Transcription, RNA Processing, and Translation | |
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| Molecular Genetics | |
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| Genomics | |
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| Epigenetic Mechanisms Regulating Gene Expression | |
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| Gene Families and Evolution | |
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| Repetitive DNA: Detection, Annotation, and Analysis | |
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| Molecular Genetics of Disease and the Human Genome Project | |
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| Clinical Human Genetics | |
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| Heredity | |
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| The Clinical Genetics Databases | |
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| Population Genetics | |
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| The UNIX Operating System | |
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| Basics and Installation | |
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| Introduction to UNIX for Biologists | |
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| Installation of the Sun Solaris Operating Environment | |
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| Sun System Administration | |
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| Managing Bioinformatics Tools | |
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| Installing Bioinformatics Software in a Server-Based Computing Environment | |
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| Management of a Server-Based Bioinformatics Resource | |
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| Command Line Sequence Analysis | |
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| GCG File Management | |
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| GCG Sequence Analysis | |
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| Computer Applications | |
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| Management and Analysis of DNA Sequencing Projects and Sequences | |
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| Managing Sequencing Projects in the GAP4 Environment | |
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| OLIGO Primer Analysis Software | |
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| Statistical Modeling of DNA Sequences and Patterns | |
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| Statistical Mining of the Matrix Attachment Regions in Genomic Sequences | |
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| Analyzing Sequences Using the Staden Package and EMBOSS | |
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| The Genome Database: Analysis and Similarity Searching | |
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| Ensembl: An Open-Source Software Tool for Large-Scale Genome Analysis | |
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| The PIR for Functional Genomics and Proteomics | |
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| Sequence Similarity and Database Searching | |
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| GCG Database Searching | |
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| Identifying Functional and Structural Sequence Elements | |
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| Pattern Discovery: Methods and Software | |
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| The Role of Transcription Factor Binding Sites in Promoters and Their In Silico Detection | |
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| An Introduction to Multiple Sequence Alignment and Analysis | |
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| 3D Molecular Visualization with Protein Explorer | |
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| Multiple Sequence Alignment and Analysis: The SeqLab Interface: A Practical Guide | |
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| Analysis of Gene Expression: Microarrays and Other Tools | |
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| Overview of the Tools for Microarray Analysis: Transcription Profiling, DNA Chips, and Differential Display | |
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| Microarrays: Tools for Gene Expression Analysis | |
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| Knowledge Discovery from the Human Transcriptome | |
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| Appendices | |
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| CD Contents | |
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| A Collection of Useful Bioinformatic Tools and Molecular Tables | |
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| Simple UNIX Commands | |
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| Index | |